Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916313.1_cds_XP_016466014.1_58911
CDS Infomation

[gene=LOC107788804] [db_xref=GeneID:107788804] [protein=von Willebrand factor A domain-containing protein DDB_G0292028-like isoform X5] [protein_id=XP_016466014.1] [location=join(34137..34154,38427..38579,38696..38908,38990..39079,39270..39386,39986..40255,40845..41001,41643..41720,42344..42444,42890..43060,43359..43433,43693..43800,44212..44529)] [gbkey=CDS]
Sequence

ATGCTAATGCCGTGGCTGGGTTCAGTTCTAGGTGTGGAAGTTGAAACACCACCAAGATCA
TATTCTACCCAATTGATTGCATCAAATGATACCAAAGATGCCAGTTTAGTAGCCAATGCT
AAAGATGGGTTCTTACTGAAACGCCAGATATACACGTTAAAGGTCCCTCAGGTTGCCGGA
GGTTCTATTCTCTCCATTAAAGTCAGTTGGTCACAGAAATTACTGTATCAAGATGGTCAA
TTTTCCTTAAATATACCTTTCAGTTTCCCATGGTATGTCAATCCAGTTGCAAAGCTATTG
TGTAAGAAAGAAAGGATTCAGTTGAACGTGAACTCTGGTATGGGGACAGAGATTTTATGC
GAAAGCTCTAGTCATCCTTTAAAGGAAACAAGACGTCTGGCCAGTAATTTAGGATTTTTA
TACGAGAGGGAAGTTCGGGCATGGTCGATGAATGACTTCAATTTCTCGTACAAAGTCCCT
TCAAGCGAGATCCGTGGGAGTGTGCTCCTGAACTCTCCGTCTATGCTTGATATTGATCAG
AGAGAAATGTTTTGCTTCTATCTTAACCCACCAACTGTCAATAGGAAGAAGGTTTTCAGG
AAAGAAGTGGTATATATTGTTGATATAAGTGCAAGCATGCAAGGAAAGCCTCTTGAGAAT
GTCAAAGCTGCACTACTGGCTGCCCTCTCTAAGCTCAATCCAGCGGATACTTTTAACATC
ATCGCTTTCAATGAGAATAGCTTATTGTTTTCATCATCCATGGTGACATCAAGCAAGGAG
TCAATCGGACAAGCAATTCAGTGGATTGATCAGAATATTGTAGCTGAGGGAAGTACTGAC
ATTTCCCTGCCTCTAAACCAGGCAATAGAGATGCTATCAAAAAATGGTGATTCAATTCCT
CTTGTTTTTCTAATCACTGATGGATCTGTTGGAGATGAAAGAGAAATTTGTGAAGCCTTG
AGGGGACAGTTGATGAAGAGAGGCTTGAAAGCTCCGCGAATTTCGACTTTTGGCATTGGT
TTATACTGTAATCACTACTTCTTGCAAATGCTTGCTCAGATGGGGAGAGGTTACTATGAT
GCTGCATACGATGTAGATTCAATCAGTTCTCGGCTAGAAAGACTACTTAACAGCACATCA
TCAGTCATTCTTGCGGACCTGAGAATCGATGCTTTGGAAAATCTTGATTCATTTGAGCTA
TATCCATGTTATCTGCCAGACCTGTTGTCTTCAAGATCACTGATTGTATCTGGCAGATTA
TTTGGGAACTGTCCTGACTCTATTAAAGTTAGCGGTACTTTAGCAGATTCGAGCAATTTC
GTGGTGGATGTCAAAGTGCAAAAAGCTAAGGATTTTCCTTTGGAAAGAGTTTTCGCAAGG
AGACAAATTGAAATGCTAACTGCCAATGCCTGGTTTTCCGGAAGCAAGCAACTGGAGGAG
AAGGTTGTGAAATTGAGCTTGCAAACAGGGGTGCCTTCAGAATATTCCAACTTGATTTTG
GTTGAAAATAAAAAGGAGAGGCAGACCTCTAAATTAGAGGTAACAGATGAGAAGACCTCC
GACTTGAATGTCAAGAAAGTCATATACCTTCGAGCACTAGGTTTTGGTTTCGGCAACTTG
AAGGCCACAGTAGACAATCTTCCTGTGGAAGCAGCAGAACCCAAGTTGCATGAAACTTCA
GAAATGGTATTTGCAGCTGCTTCAAACTTTTGCGGCAAACTATGTGACTGTTGCTGTTGC
ATGTGTTTCATACAGTTCTGTTCTCGGGTTAATGATCGATGTGCTGTTACTTTAGCACAG
CTTTGTACAGCACTTGCTTGTTTTGAGTGTTTTAGTTTTTGTTGTGAAGTCTGTGGAGAA
TGCGGCTAA

Peptide Sequence

PEP ID

XP_016466014.1
PEP Infomation

PREDICTED: von Willebrand factor A domain-containing protein DDB_G0292028-like isoform X5 [Nicotiana tabacum]
Sequence

MLMPWLGSVLGVEVETPPRSYSTQLIASNDTKDASLVANAKDGFLLKRQIYTLKVPQVAG
GSILSIKVSWSQKLLYQDGQFSLNIPFSFPWYVNPVAKLLCKKERIQLNVNSGMGTEILC
ESSSHPLKETRRLASNLGFLYEREVRAWSMNDFNFSYKVPSSEIRGSVLLNSPSMLDIDQ
REMFCFYLNPPTVNRKKVFRKEVVYIVDISASMQGKPLENVKAALLAALSKLNPADTFNI
IAFNENSLLFSSSMVTSSKESIGQAIQWIDQNIVAEGSTDISLPLNQAIEMLSKNGDSIP
LVFLITDGSVGDEREICEALRGQLMKRGLKAPRISTFGIGLYCNHYFLQMLAQMGRGYYD
AAYDVDSISSRLERLLNSTSSVILADLRIDALENLDSFELYPCYLPDLLSSRSLIVSGRL
FGNCPDSIKVSGTLADSSNFVVDVKVQKAKDFPLERVFARRQIEMLTANAWFSGSKQLEE
KVVKLSLQTGVPSEYSNLILVENKKERQTSKLEVTDEKTSDLNVKKVIYLRALGFGFGNL
KATVDNLPVEAAEPKLHETSEMVFAAASNFCGKLCDCCCCMCFIQFCSRVNDRCAVTLAQ
LCTALACFECFSFCCEVCGECG

Transcript Sequence

Gene sequence data has not been registered.